EnhancerDB
  1. Home
  2. SNP
  3. rs397873564[chr2:28941104]
Enhancers that have rs397873564[chr2:28941104]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs397873564[chr2:28941104]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28941098 28941119 IRF1 JASPAR yes 72673285
chr2 28941101 28941116 FOXP1 JASPAR yes 72673286
chr2 28941103 28941118 FOXP1 JASPAR yes 72673287
chr2 28941104 28941119 FOXP1 JASPAR yes 72673288
Genes associated with rs397873564[chr2:28941104], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More