EnhancerDB
  1. Home
  2. SNP
  3. rs397883854[chr5:172170480]
Enhancers that have rs397883854[chr5:172170480]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397883854[chr5:172170480]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172170477 172170492 FOXP1 JASPAR yes 67821165
chr5 172170478 172170493 FOXP1 JASPAR yes 67821166
chr5 172170479 172170494 FOXP1 JASPAR yes 67821167
chr5 172170480 172170495 FOXP1 JASPAR yes 67821168
Genes associated with rs397883854[chr5:172170480], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More