EnhancerDB
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  3. rs397933408[chr18:55447129]
Enhancers that have rs397933408[chr18:55447129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397933408[chr18:55447129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55447126 55447141 FOXP1 JASPAR yes 110884897
chr18 55447127 55447142 FOXP1 JASPAR yes 110884898
chr18 55447128 55447143 FOXP1 JASPAR yes 110884899
chr18 55447128 55447149 IRF1 JASPAR yes 110884900
chr18 55447129 55447144 FOXP1 JASPAR yes 110884901
Genes associated with rs397933408[chr18:55447129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More