EnhancerDB
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  3. rs397933627[chr12:53758143]
Enhancers that have rs397933627[chr12:53758143]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53754815 53768707 enh2366
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs397933627[chr12:53758143]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53758020 53758560 ZNF274 GTRD no Bone Marrow (K562) 21549237
chr12 53758049 53758567 ZNF274 GTRD no Bone Marrow (K562) 21549238
chr12 53758137 53758158 IRF1 JASPAR yes 120982429
chr12 53758138 53758159 IRF1 JASPAR yes 120982430
chr12 53758142 53758157 FOXP1 JASPAR yes 120982431
chr12 53758143 53758158 FOXP1 JASPAR yes 120982432
Genes associated with rs397933627[chr12:53758143], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More