EnhancerDB
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  3. rs397936932[chr12:50981919]
Enhancers that have rs397936932[chr12:50981919]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50971777 51003055 enh2348
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs397936932[chr12:50981919]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50981908 50981929 IRF1 JASPAR yes 120848183
chr12 50981909 50981930 IRF1 JASPAR yes 120848184
chr12 50981913 50981934 IRF1 JASPAR yes 120848185
chr12 50981914 50981929 FOXP1 JASPAR yes 120848186
chr12 50981914 50981935 IRF1 JASPAR yes 120848187
chr12 50981915 50981930 STAT2 JASPAR yes 120848188
chr12 50981916 50981931 FOXP1 JASPAR yes 120848189
chr12 50981918 50981933 FOXP1 JASPAR yes 120848190
chr12 50981918 50981939 IRF1 JASPAR yes 120848191
chr12 50981919 50981934 FOXP1 JASPAR yes 120848192
chr12 50981919 50981940 IRF1 JASPAR yes 120848193
Genes associated with rs397936932[chr12:50981919], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More