EnhancerDB
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  3. rs397943550[chr1:9496425]
Enhancers that have rs397943550[chr1:9496425]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9492342 9521379 enh11486
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397943550[chr1:9496425]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9496411 9496425 GATA2 JASPAR yes 26650409
chr1 9496411 9496425 TCF7L2 JASPAR yes 26650410
chr1 9496411 9496426 LEF1 JASPAR yes 26650411
chr1 9496414 9496435 IRF1 JASPAR yes 26650413
chr1 9496420 9496441 IRF1 JASPAR yes 26650414
chr1 9496424 9496439 PRDM1 JASPAR yes 26650415
Genes associated with rs397943550[chr1:9496425], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More