EnhancerDB
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  3. rs397943922[chr17:40412935]
Enhancers that have rs397943922[chr17:40412935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs397943922[chr17:40412935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40412927 40412941 SPIC JASPAR yes 54291186
chr17 40412929 40412950 IRF1 JASPAR yes 54291187
chr17 40412933 40412948 FOXP1 JASPAR yes 54291188
chr17 40412934 40412949 FOXP1 JASPAR yes 54291189
chr17 40412935 40412950 FOXP1 JASPAR yes 54291190
Genes associated with rs397943922[chr17:40412935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More