EnhancerDB
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  3. rs397948992[chr1:212103602]
Enhancers that have rs397948992[chr1:212103602]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs397948992[chr1:212103602]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212103596 212103617 IRF1 JASPAR yes 35093005
chr1 212103597 212103618 IRF1 JASPAR yes 35093006
chr1 212103600 212103615 FOXP1 JASPAR yes 35093007
chr1 212103601 212103616 FOXP1 JASPAR yes 35093008
chr1 212103602 212103617 FOXP1 JASPAR yes 35093009
Genes associated with rs397948992[chr1:212103602], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More