EnhancerDB
  1. Home
  2. SNP
  3. rs397952166[chr16:87819282]
Enhancers that have rs397952166[chr16:87819282]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs397952166[chr16:87819282]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87818760 87819358 ZNF274 GTRD no Liver (HepG2) 21734477
chr16 87819267 87819287 RREB1 JASPAR yes 12239181
chr16 87819268 87819288 RREB1 JASPAR yes 12239182
chr16 87819269 87819289 RREB1 JASPAR yes 12239183
chr16 87819271 87819291 RREB1 JASPAR yes 12239184
chr16 87819271 87820363 TCF7L2 GTRD no Colon (HCT116) 21734478
chr16 87819272 87819284 ZBTB7B JASPAR yes 12239185
chr16 87819274 87819294 RREB1 JASPAR yes 12239186
chr16 87819276 87819286 SP1 JASPAR yes 12239188
chr16 87819279 87819284 SP1 TRANSFAC yes 12239189
chr16 87819279 87819289 ZNF740 JASPAR yes 12239190
chr16 87819280 87819290 SP1 JASPAR yes 12239191
chr16 87819280 87819290 ZNF740 JASPAR yes 12239192
chr16 87819281 87819291 ZNF740 JASPAR yes 12239193
chr16 87819282 87819292 ZNF740 JASPAR yes 12239194
Genes associated with rs397952166[chr16:87819282], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More