EnhancerDB
  1. Home
  2. SNP
  3. rs397953570[chr2:121678476]
Enhancers that have rs397953570[chr2:121678476]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 121660105 121703500 enh18849
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397953570[chr2:121678476]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 121678455 121678476 IRF1 JASPAR yes 76589011
chr2 121678470 121678491 IRF1 JASPAR yes 76589012
chr2 121678474 121678489 FOXP1 JASPAR yes 76589013
chr2 121678475 121678490 FOXP1 JASPAR yes 76589014
chr2 121678475 121678496 IRF1 JASPAR yes 76589015
chr2 121678476 121678491 FOXP1 JASPAR yes 76589016
chr2 121678476 121678497 IRF1 JASPAR yes 76589017
Genes associated with rs397953570[chr2:121678476], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More