EnhancerDB
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  3. rs397959297[chr1:170531332]
Enhancers that have rs397959297[chr1:170531332]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 170524205 170534569 enh12364
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Muscle (A673) Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs397959297[chr1:170531332]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 170530892 170532991 ZNF143 GTRD no Epithelial (MCF-7) 21349543
chr1 170531170 170531473 ZNF143 GTRD no Epithelial (MCF-7) 21349544
chr1 170531215 170532722 ZNF143 GTRD no Epithelial (MCF-7) 21349545
chr1 170531231 170533788 ZNF274 GTRD no Cervix (HeLa-S3) 21349546
chr1 170531290 170532926 ZNF143 GTRD no Epithelial (MCF-7) 21349547
chr1 170531316 170531337 IRF1 JASPAR yes 33040575
chr1 170531320 170531335 STAT2 JASPAR yes 33040576
chr1 170531322 170531343 IRF1 JASPAR yes 33040577
chr1 170531326 170531341 FOXP1 JASPAR yes 33040578
chr1 170531327 170531342 FOXP1 JASPAR yes 33040579
chr1 170531327 170531348 IRF1 JASPAR yes 33040580
chr1 170531328 170531343 FOXP1 JASPAR yes 33040581
chr1 170531328 170531349 IRF1 JASPAR yes 33040582
chr1 170531329 170533044 ZNF274 GTRD no Cervix (HeLa-S3) 21349548
chr1 170531332 170531346 STAT1 JASPAR yes 33040583
chr1 170531332 170531347 STAT2 JASPAR yes 33040584
Genes associated with rs397959297[chr1:170531332], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More