EnhancerDB
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  3. rs397960668[chr6:13769226]
Enhancers that have rs397960668[chr6:13769226]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13758685 13770250 enh23046
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Muscle (Myotube) Uterus Stomach
Transcript factors that have rs397960668[chr6:13769226]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13769221 13769242 IRF1 JASPAR yes 100056654
chr6 13769223 13769238 FOXP1 JASPAR yes 100056655
chr6 13769224 13769239 FOXP1 JASPAR yes 100056656
chr6 13769225 13769231 TBP TRANSFAC yes 100056657
chr6 13769225 13769240 FOXP1 JASPAR yes 100056658
chr6 13769225 13769246 IRF1 JASPAR yes 100056659
chr6 13769226 13769241 FOXP1 JASPAR yes 100056660
chr6 13769226 13769247 IRF1 JASPAR yes 100056661
Genes associated with rs397960668[chr6:13769226], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More