EnhancerDB
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  3. rs397960933[chr5:153578316]
Enhancers that have rs397960933[chr5:153578316]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 153567505 153585038 enh38530
Bone Marrow (K562) Prostate (PC-3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Uterus Pancreas (Panc1) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs397960933[chr5:153578316]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 153578312 153578327 TFAP2C JASPAR yes 67015399
chr5 153578313 153578332 CTCF JASPAR yes 67015400
chr5 153578314 153578327 TFAP2A JASPAR yes 67015401
chr5 153578314 153578327 TFAP2B JASPAR yes 67015402
chr5 153578314 153578327 TFAP2C JASPAR yes 67015403
chr5 153578314 153578328 EBF1 JASPAR yes 67015404
chr5 153578315 153578326 EBF1 JASPAR yes 67015405
Genes associated with rs397960933[chr5:153578316], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More