EnhancerDB
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  3. rs397960965[chr17:78720638]
Enhancers that have rs397960965[chr17:78720638]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs397960965[chr17:78720638]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78720632 78720653 IRF1 JASPAR yes 56274358
chr17 78720634 78720649 STAT2 JASPAR yes 56274359
Genes associated with rs397960965[chr17:78720638], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More