EnhancerDB
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  3. rs397974613[chr1:210546124]
Enhancers that have rs397974613[chr1:210546124]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 210543485 210560329 enh27456
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs397974613[chr1:210546124]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 210546118 210546139 IRF1 JASPAR yes 35023213
chr1 210546119 210546134 FOXP1 JASPAR yes 35023214
chr1 210546121 210546136 FOXP1 JASPAR yes 35023215
chr1 210546123 210546138 FOXP1 JASPAR yes 35023216
chr1 210546124 210546139 FOXP1 JASPAR yes 35023217
Genes associated with rs397974613[chr1:210546124], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More