EnhancerDB
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  3. rs397979154[chr1:9830087]
Enhancers that have rs397979154[chr1:9830087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9816649 9832635 enh52
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs397979154[chr1:9830087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9830084 9830099 FOXP1 JASPAR yes 26675816
chr1 9830085 9830100 FOXP1 JASPAR yes 26675817
chr1 9830086 9830101 FOXP1 JASPAR yes 26675818
chr1 9830087 9830102 FOXP1 JASPAR yes 26675819
chr1 9830087 9830108 IRF1 JASPAR yes 26675820
Genes associated with rs397979154[chr1:9830087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More