EnhancerDB
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  3. rs397979419[chr1:19265276]
Enhancers that have rs397979419[chr1:19265276]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397979419[chr1:19265276]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19265275 19265285 ZNF740 JASPAR yes 27163681
chr1 19265275 19265289 GLIS2 JASPAR yes 27163682
chr1 19265275 19265289 GLIS3 JASPAR yes 27163683
chr1 19265276 19265288 TFAP2A JASPAR yes 27163684
chr1 19265276 19265290 EBF1 JASPAR yes 27163685
Genes associated with rs397979419[chr1:19265276], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More