EnhancerDB
  1. Home
  2. SNP
  3. rs397979608[chr1:23699630]
Enhancers that have rs397979608[chr1:23699630]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23696605 23707075 enh11609
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs397979608[chr1:23699630]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23699627 23699642 FOXP1 JASPAR yes 27429999
chr1 23699628 23699643 FOXP1 JASPAR yes 27430000
chr1 23699629 23699644 FOXP1 JASPAR yes 27430001
chr1 23699630 23699645 FOXP1 JASPAR yes 27430002
chr1 23699630 23699651 IRF1 JASPAR yes 27430003
Genes associated with rs397979608[chr1:23699630], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More