EnhancerDB
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  3. rs397979945[chr1:40409196]
Enhancers that have rs397979945[chr1:40409196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40395645 40411775 enh11770
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Placenta Breast Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs397979945[chr1:40409196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40409190 40409211 IRF1 JASPAR yes 28302038
chr1 40409192 40409207 PRDM1 JASPAR yes 28302040
chr1 40409192 40409207 STAT2 JASPAR yes 28302041
chr1 40409195 40409210 FOXP1 JASPAR yes 28302042
chr1 40409196 40409211 FOXP1 JASPAR yes 28302043
Genes associated with rs397979945[chr1:40409196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More