EnhancerDB
  1. Home
  2. SNP
  3. rs397982623[chr1:201423239]
Enhancers that have rs397982623[chr1:201423239]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397982623[chr1:201423239]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201423233 201423248 FOXP1 JASPAR yes 34495277
chr1 201423234 201423249 FOXP1 JASPAR yes 34495278
chr1 201423235 201423250 FOXP1 JASPAR yes 34495279
chr1 201423235 201423256 IRF1 JASPAR yes 34495280
chr1 201423236 201423251 FOXP1 JASPAR yes 34495281
chr1 201423236 201423257 IRF1 JASPAR yes 34495282
chr1 201423236 201424441 ZNF143 GTRD no Epithelial (MCF-7) 21364048
chr1 201423237 201423252 FOXP1 JASPAR yes 34495283
chr1 201423239 201423254 FOXP1 JASPAR yes 34495284
Genes associated with rs397982623[chr1:201423239], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More