EnhancerDB
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  3. rs397983000[chr1:224391763]
Enhancers that have rs397983000[chr1:224391763]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs397983000[chr1:224391763]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224390131 224391897 TEF1 GTRD no Bone (Osteoblast) 21384202
chr1 224391271 224391841 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21384206
chr1 224391344 224391814 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21384207
chr1 224391415 224394417 ZNF274 GTRD no Bone Marrow (K562) 21384208
chr1 224391415 224394417 ZNF274 GTRD no Bone Marrow (K562) 107873609
chr1 224391756 224391771 FOXP1 JASPAR yes 35693472
chr1 224391758 224391773 FOXP1 JASPAR yes 35693473
chr1 224391758 224391779 IRF1 JASPAR yes 35693474
chr1 224391759 224391774 FOXP1 JASPAR yes 35693475
chr1 224391759 224391780 IRF1 JASPAR yes 35693476
chr1 224391760 224391775 FOXP1 JASPAR yes 35693477
chr1 224391762 224391768 TBP TRANSFAC yes 35693478
Genes associated with rs397983000[chr1:224391763], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More