EnhancerDB
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  3. rs397986980[chr2:188411158]
Enhancers that have rs397986980[chr2:188411158]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 188402465 188418715 enh19074
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Lung (PC-9) Esophagus Liver Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs397986980[chr2:188411158]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 188411141 188411159 SRF JASPAR yes 79519268
chr2 188411151 188411172 IRF1 JASPAR yes 79519271
chr2 188411155 188411170 STAT2 JASPAR yes 79519272
chr2 188411156 188411171 FOXP1 JASPAR yes 79519273
chr2 188411158 188411170 FOXC2 JASPAR yes 79519274
Genes associated with rs397986980[chr2:188411158], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More