EnhancerDB
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  3. rs397989767[chr3:57960471]
Enhancers that have rs397989767[chr3:57960471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57952365 57980395 enh7247
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397989767[chr3:57960471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57960437 57960994 EP300 UCSC Txn Factor no Conserved 108529355
chr3 57960439 57960895 JUND UCSC Txn Factor no Conserved 108529356
chr3 57960465 57960476 HOXA10 JASPAR yes 2659412
chr3 57960466 57960476 HOXB13 JASPAR yes 2659413
chr3 57960466 57960476 HOXD13 JASPAR yes 2659414
chr3 57960466 57960481 FOXP1 JASPAR yes 2659415
chr3 57960467 57960482 FOXP1 JASPAR yes 2659416
chr3 57960467 57960488 IRF1 JASPAR yes 2659417
chr3 57960468 57960483 FOXP1 JASPAR yes 2659418
chr3 57960468 57960489 IRF1 JASPAR yes 2659419
chr3 57960469 57960484 FOXP1 JASPAR yes 2659420
chr3 57960470 57960476 TBP TRANSFAC yes 2659421
chr3 57960471 57960486 FOXP1 JASPAR yes 2659422
Genes associated with rs397989767[chr3:57960471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More