EnhancerDB
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  3. rs397989784[chr3:58342339]
Enhancers that have rs397989784[chr3:58342339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58318801 58350235 enh7249
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs397989784[chr3:58342339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58342322 58342343 IRF1 JASPAR yes 2689071
chr3 58342323 58342344 IRF1 JASPAR yes 2689073
chr3 58342324 58342339 STAT2 JASPAR yes 2689075
chr3 58342327 58342342 FOXP1 JASPAR yes 2689076
chr3 58342327 58342348 IRF1 JASPAR yes 2689077
chr3 58342328 58342343 FOXP1 JASPAR yes 2689078
chr3 58342329 58342344 FOXP1 JASPAR yes 2689079
chr3 58342329 58342350 IRF1 JASPAR yes 2689080
chr3 58342334 58342349 FOXP1 JASPAR yes 2689081
Genes associated with rs397989784[chr3:58342339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More