EnhancerDB
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  3. rs397999930[chr5:171408151]
Enhancers that have rs397999930[chr5:171408151]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171406325 171422095 enh38666
Skin (Keratinocyte) Prostate (PC-3) Esophagus Astrocyte Blood (GM12878) Stomach Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs397999930[chr5:171408151]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171408139 171408153 RORA JASPAR yes 67753889
chr5 171408141 171408152 YY2 JASPAR yes 67753891
chr5 171408146 171408156 HOXA13 JASPAR yes 67753892
chr5 171408146 171408156 HOXB13 JASPAR yes 67753893
chr5 171408146 171408156 HOXD13 JASPAR yes 67753894
chr5 171408147 171408151 YY1 TRANSFAC yes 67753895
chr5 171408150 171408156 TBP TRANSFAC yes 67753896
Genes associated with rs397999930[chr5:171408151], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More