EnhancerDB
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  3. rs398000999[chr6:25172353]
Enhancers that have rs398000999[chr6:25172353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs398000999[chr6:25172353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25172348 25172363 MEF2C JASPAR yes 100831134
chr6 25172349 25172364 MEF2A JASPAR yes 100831135
chr6 25172350 25172362 MEF2A JASPAR yes 100831136
chr6 25172350 25172362 MEF2B JASPAR yes 100831137
chr6 25172350 25172362 MEF2D JASPAR yes 100831138
Genes associated with rs398000999[chr6:25172353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More