EnhancerDB
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  3. rs398001128[chr6:34922921]
Enhancers that have rs398001128[chr6:34922921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34911225 34934612 enh9072
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Ovary Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Adrenal Spleen Muscle (Myotube) Neural Stem Cells (H9) Pancreas (Panc1) Heart
Transcript factors that have rs398001128[chr6:34922921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34922900 34922921 IRF1 JASPAR yes 101251850
chr6 34922905 34922926 IRF1 JASPAR yes 101251852
chr6 34922906 34922921 FOXP1 JASPAR yes 101251853
chr6 34922906 34922927 IRF1 JASPAR yes 101251854
chr6 34922907 34922922 STAT2 JASPAR yes 101251855
chr6 34922910 34922931 IRF1 JASPAR yes 101251856
chr6 34922911 34922926 FOXP1 JASPAR yes 101251857
chr6 34922911 34922932 IRF1 JASPAR yes 101251858
chr6 34922915 34922936 IRF1 JASPAR yes 101251859
chr6 34922916 34922931 FOXP1 JASPAR yes 101251860
Genes associated with rs398001128[chr6:34922921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More