EnhancerDB
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  3. rs398002549[chr6:107997802]
Enhancers that have rs398002549[chr6:107997802]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107984585 108002855 enh9300
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Astrocyte Bone (Osteoblast) Colon (HCT116) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs398002549[chr6:107997802]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107997799 107997814 FOXP1 JASPAR yes 104129373
chr6 107997800 107997815 FOXP1 JASPAR yes 104129374
chr6 107997801 107997807 TBP TRANSFAC yes 104129375
chr6 107997801 107997816 FOXP1 JASPAR yes 104129376
chr6 107997801 107997822 IRF1 JASPAR yes 104129377
chr6 107997802 107997817 FOXP1 JASPAR yes 104129378
chr6 107997802 107997823 IRF1 JASPAR yes 104129379
Genes associated with rs398002549[chr6:107997802], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More