EnhancerDB
  1. Home
  2. SNP
  3. rs398002607[chr6:111869906]
Enhancers that have rs398002607[chr6:111869906]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 111869465 111876495 enh23513
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs398002607[chr6:111869906]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 111869892 111869907 IRF9 JASPAR yes 104352754
chr6 111869893 111869907 IRF7 JASPAR yes 104352755
chr6 111869893 111869907 IRF8 JASPAR yes 104352756
chr6 111869894 111869909 PRDM1 JASPAR yes 104352757
chr6 111869894 111869909 STAT2 JASPAR yes 104352758
chr6 111869894 111869912 IRF2 JASPAR yes 104352759
chr6 111869900 111869920 RREB1 JASPAR yes 104352761
chr6 111869900 111869921 IRF1 JASPAR yes 104352762
chr6 111869902 111869917 STAT2 JASPAR yes 104352763
chr6 111869904 111869919 IRF9 JASPAR yes 104352764
Genes associated with rs398002607[chr6:111869906], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 111877657 111927481 - TRAF3IP2 ENSG00000056972.14 111927481 7751 Breast 0.131497 6876