EnhancerDB
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  3. rs398019522[chr12:50974321]
Enhancers that have rs398019522[chr12:50974321]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50971777 51003055 enh2348
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs398019522[chr12:50974321]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50974303 50974324 IRF1 JASPAR yes 120847019
chr12 50974303 50974324 ZNF263 JASPAR yes 120847020
chr12 50974304 50974325 IRF1 JASPAR yes 120847022
chr12 50974309 50974324 FOXP1 JASPAR yes 120847024
chr12 50974309 50974330 IRF1 JASPAR yes 120847025
chr12 50974310 50974331 IRF1 JASPAR yes 120847026
chr12 50974311 50974332 IRF1 JASPAR yes 120847027
chr12 50974314 50974328 SPIC JASPAR yes 120847028
chr12 50974315 50974336 IRF1 JASPAR yes 120847029
chr12 50974316 50974337 IRF1 JASPAR yes 120847030
chr12 50974317 50974322 ETS2 TRANSFAC yes 120847031
chr12 50974319 50974334 FOXP1 JASPAR yes 120847032
chr12 50974320 50974335 FOXP1 JASPAR yes 120847033
chr12 50974321 50974336 FOXP1 JASPAR yes 120847034
Genes associated with rs398019522[chr12:50974321], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More