EnhancerDB
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  3. rs398020068[chr12:71037551]
Enhancers that have rs398020068[chr12:71037551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 71035785 71044892 enh43768
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Stomach Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr12 71037443 71037574 vista13994
VISTA
Transcript factors that have rs398020068[chr12:71037551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 71037535 71037556 IRF1 JASPAR yes 82432434
chr12 71037535 71037556 IRF1 JASPAR yes 121785584
chr12 71037539 71037560 IRF1 JASPAR yes 82432435
chr12 71037539 71037560 IRF1 JASPAR yes 121785585
chr12 71037544 71037558 SPIC JASPAR yes 82432436
chr12 71037544 71037558 SPIC JASPAR yes 121785586
chr12 71037545 71037566 IRF1 JASPAR yes 82432437
chr12 71037545 71037566 IRF1 JASPAR yes 121785587
chr12 71037547 71037562 PRDM1 JASPAR yes 82432438
chr12 71037547 71037562 STAT2 JASPAR yes 82432439
chr12 71037547 71037562 PRDM1 JASPAR yes 121785588
chr12 71037547 71037562 STAT2 JASPAR yes 121785589
chr12 71037549 71037570 IRF1 JASPAR yes 82432440
chr12 71037549 71037570 IRF1 JASPAR yes 121785590
chr12 71037550 71037565 FOXP1 JASPAR yes 82432441
chr12 71037550 71037565 FOXP1 JASPAR yes 121785591
chr12 71037550 71037571 IRF1 JASPAR yes 82432442
chr12 71037550 71037571 IRF1 JASPAR yes 121785592
chr12 71037551 71037566 FOXP1 JASPAR yes 82432443
chr12 71037551 71037566 FOXP1 JASPAR yes 121785593
chr12 71037551 71037572 IRF1 JASPAR yes 82432444
chr12 71037551 71037572 IRF1 JASPAR yes 121785594
Genes associated with rs398020068[chr12:71037551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More