EnhancerDB
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  3. rs398021501[chr12:124961448]
Enhancers that have rs398021501[chr12:124961448]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs398021501[chr12:124961448]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124961445 124961460 FOXP1 JASPAR yes 124382480
chr12 124961446 124961461 FOXP1 JASPAR yes 124382481
chr12 124961447 124961453 TBP TRANSFAC yes 124382482
chr12 124961447 124961462 FOXP1 JASPAR yes 124382483
chr12 124961447 124961468 IRF1 JASPAR yes 124382484
chr12 124961448 124961463 FOXP1 JASPAR yes 124382485
chr12 124961448 124961469 IRF1 JASPAR yes 124382486
Genes associated with rs398021501[chr12:124961448], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More