EnhancerDB
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Enhancers that have rs398028507[chr15:99342596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99326765 99367158 enh44218
Colon (HCT116) Pancreas Uterus Kidney Stomach Ovary Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr15 99342514 99342944 vista21381
VISTA
Transcript factors that have rs398028507[chr15:99342596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99342426 99343022 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21681507
chr15 99342426 99343022 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108167519
chr15 99342505 99342975 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108167520
chr15 99342510 99342980 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21681508
chr15 99342510 99342980 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108167521
chr15 99342511 99343007 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108167522
chr15 99342533 99343103 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108167523
chr15 99342583 99343123 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108167524
chr15 99342591 99342606 MEF2C JASPAR yes 25834703
chr15 99342591 99342606 MEF2C JASPAR yes 70592408
chr15 99342592 99343048 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21681509
chr15 99342592 99343048 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108167525
chr15 99342593 99342608 FOXP1 JASPAR yes 25834704
chr15 99342593 99342608 FOXP1 JASPAR yes 70592409
chr15 99342594 99342609 FOXP1 JASPAR yes 25834705
chr15 99342594 99342609 FOXP1 JASPAR yes 70592410
chr15 99342594 99342615 IRF1 JASPAR yes 25834706
chr15 99342594 99342615 IRF1 JASPAR yes 70592411
chr15 99342595 99342601 TBP TRANSFAC yes 25834707
chr15 99342595 99342601 TBP TRANSFAC yes 70592412
chr15 99342595 99342610 FOXP1 JASPAR yes 25834708
chr15 99342595 99342610 FOXP1 JASPAR yes 70592413
Genes associated with rs398028507[chr15:99342596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More