EnhancerDB
  1. Home
  2. SNP
  3. rs398028790[chr16:14409220]
Enhancers that have rs398028790[chr16:14409220]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14391425 14410135 enh3904
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs398028790[chr16:14409220]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14409216 14409231 PRDM1 JASPAR yes 9682448
chr16 14409216 14409231 STAT2 JASPAR yes 9682449
chr16 14409219 14409234 FOXP1 JASPAR yes 9682450
chr16 14409220 14409235 FOXP1 JASPAR yes 9682451
Genes associated with rs398028790[chr16:14409220], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More