EnhancerDB
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  3. rs398040898[chr19:11051044]
Enhancers that have rs398040898[chr19:11051044]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs398040898[chr19:11051044]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11050691 11051252 TCF7L2 GTRD no Colon (HCT116) 21849228
chr19 11050812 11051420 TCF7L2 GTRD no Colon (HCT116) 21849229
chr19 11050851 11051178 ZNF274 GTRD no Bone Marrow (K562) 21849230
chr19 11050892 11051174 ZNF274 GTRD no Bone Marrow (K562) 21849231
chr19 11051026 11051047 IRF1 JASPAR yes 112446722
chr19 11051028 11051049 IRF1 JASPAR yes 112446725
chr19 11051030 11051045 STAT2 JASPAR yes 112446726
chr19 11051031 11051045 STAT1 JASPAR yes 112446727
chr19 11051032 11051046 IRF7 JASPAR yes 112446728
chr19 11051032 11051053 IRF1 JASPAR yes 112446729
chr19 11051033 11051048 FOXP1 JASPAR yes 112446730
chr19 11051033 11051054 IRF1 JASPAR yes 112446731
chr19 11051034 11051049 PRDM1 JASPAR yes 112446732
chr19 11051034 11051055 IRF1 JASPAR yes 112446733
chr19 11051038 11051059 IRF1 JASPAR yes 112446734
chr19 11051039 11051054 FOXP1 JASPAR yes 112446735
chr19 11051041 11051056 FOXP1 JASPAR yes 112446736
chr19 11051043 11051058 FOXP1 JASPAR yes 112446737
chr19 11051044 11051059 FOXP1 JASPAR yes 112446738
Genes associated with rs398040898[chr19:11051044], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More