EnhancerDB
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  3. rs398050129[chr1:224385567]
Enhancers that have rs398050129[chr1:224385567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs398050129[chr1:224385567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224385561 224385582 IRF1 JASPAR yes 35692639
chr1 224385563 224385578 STAT2 JASPAR yes 35692640
chr1 224385566 224385581 FOXP1 JASPAR yes 35692641
chr1 224385567 224385582 FOXP1 JASPAR yes 35692642
Genes associated with rs398050129[chr1:224385567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More