EnhancerDB
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  3. rs398053711[chr1:201700316]
Enhancers that have rs398053711[chr1:201700316]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs398053711[chr1:201700316]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201700305 201700320 FOXP1 JASPAR yes 34525780
chr1 201700309 201700330 MAFG JASPAR yes 34525781
chr1 201700314 201700332 MAFF JASPAR yes 34525782
chr1 201700315 201700330 MAFK JASPAR yes 34525783
Genes associated with rs398053711[chr1:201700316], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 202317827 202561834 + PPP1R12B ENSG00000077157.16 202317827 617511 Liver 0.304096 1722