EnhancerDB
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  3. rs398079198[chr17:78758040]
Enhancers that have rs398079198[chr17:78758040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs398079198[chr17:78758040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78758035 78758050 MEF2C JASPAR yes 56278997
chr17 78758039 78758054 FOXP1 JASPAR yes 56278998
chr17 78758040 78758055 STAT2 JASPAR yes 56278999
Genes associated with rs398079198[chr17:78758040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More