EnhancerDB
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  3. rs398080186[chr2:38418805]
Enhancers that have rs398080186[chr2:38418805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38392345 38424335 enh18456
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Lung Blood (GM12878) Placenta Thyroid Uterus Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr2 38418747 38419129 vista31101
VISTA
Transcript factors that have rs398080186[chr2:38418805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38418791 38418809 RARA JASPAR yes 22037584
chr2 38418791 38418809 RARA JASPAR yes 73119498
chr2 38418800 38418814 IRF7 JASPAR yes 22037585
chr2 38418800 38418814 IRF7 JASPAR yes 73119499
chr2 38418800 38418815 IRF9 JASPAR yes 22037586
chr2 38418800 38418815 IRF9 JASPAR yes 73119500
chr2 38418803 38418819 ZNF143 JASPAR yes 22037587
chr2 38418803 38418819 ZNF143 JASPAR yes 73119501
chr2 38418803 38418823 RREB1 JASPAR yes 22037588
chr2 38418803 38418823 RREB1 JASPAR yes 73119502
Genes associated with rs398080186[chr2:38418805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More