EnhancerDB
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  3. rs398091121[chr2:227626487]
Enhancers that have rs398091121[chr2:227626487]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227617325 227640615 enh6179
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs398091121[chr2:227626487]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227626477 227626488 PHOX2A JASPAR yes 81493293
chr2 227626477 227626488 PROP1 JASPAR yes 81493294
chr2 227626480 227626490 EMX1 JASPAR yes 81493295
chr2 227626480 227626490 EMX2 JASPAR yes 81493296
chr2 227626480 227626490 EVX1 JASPAR yes 81493297
chr2 227626480 227626490 EVX2 JASPAR yes 81493298
chr2 227626480 227626490 HESX1 JASPAR yes 81493299
chr2 227626480 227626490 HOXA2 JASPAR yes 81493300
chr2 227626480 227626490 HOXB2 JASPAR yes 81493301
chr2 227626480 227626490 LHX2 JASPAR yes 81493302
chr2 227626480 227626490 LHX6 JASPAR yes 81493303
chr2 227626480 227626490 MEOX1 JASPAR yes 81493304
chr2 227626480 227626490 MEOX2 JASPAR yes 81493305
chr2 227626480 227626490 NOTO JASPAR yes 81493306
chr2 227626481 227626489 LBX1 JASPAR yes 81493307
chr2 227626481 227626489 PDX1 JASPAR yes 81493308
chr2 227626481 227626489 VAX1 JASPAR yes 81493309
chr2 227626481 227626489 VAX2 JASPAR yes 81493310
chr2 227626481 227626489 VSX1 JASPAR yes 81493311
chr2 227626481 227626489 VSX2 JASPAR yes 81493312
chr2 227626481 227626491 POU6F2 JASPAR yes 81493313
Genes associated with rs398091121[chr2:227626487], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More