EnhancerDB
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  3. rs398099362[chr14:55766212]
Enhancers that have rs398099362[chr14:55766212]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55762685 55778955 enh3215
Skin (Keratinocyte) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Heart
chr14 55765939 55766288 vista17873
VISTA
Transcript factors that have rs398099362[chr14:55766212]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55765789 55766473 ZNF274 GTRD no Bone Marrow (K562) 108104107
chr14 55766023 55766356 ZNF274 GTRD no Bone Marrow (K562) 108104108
chr14 55766027 55766427 ZNF274 GTRD no Bone Marrow (K562) 108104109
chr14 55766052 55766478 ZNF274 GTRD no Bone Marrow (K562) 108104110
chr14 55766059 55766412 ZNF274 GTRD no Bone Marrow (K562) 108104111
chr14 55766061 55766392 ZNF274 GTRD no Liver (HepG2) 108104112
chr14 55766068 55766402 ZNF274 GTRD no Bone Marrow (K562) 108104113
chr14 55766097 55766348 ZNF274 GTRD no Liver (HepG2) 108104114
chr14 55766098 55766311 ZNF274 GTRD no Bone Marrow (K562) 108104115
chr14 55766100 55766524 ZNF143 GTRD no Epithelial (MCF-7) 21620471
chr14 55766100 55766524 ZNF143 GTRD no Epithelial (MCF-7) 108104116
chr14 55766108 55766960 ZNF143 GTRD no Epithelial (MCF-7) 21620472
chr14 55766108 55766960 ZNF143 GTRD no Epithelial (MCF-7) 108104117
chr14 55766127 55766501 ZNF274 GTRD no Bone Marrow (K562) 108104118
chr14 55766206 55766227 IRF1 JASPAR yes 107553520
chr14 55766206 55766227 IRF1 JASPAR yes 115540204
chr14 55766211 55766630 TCF7L2 GTRD no Colon (HCT116) 21620473
chr14 55766211 55766630 TCF7L2 GTRD no Colon (HCT116) 108104119
Genes associated with rs398099362[chr14:55766212], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr14 55833110 55878576 - ATG14 ENSG00000126775.8 55878576 66898 Esophagus 0.0483985 13338