EnhancerDB
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  3. rs398109157[chr5:90599844]
Enhancers that have rs398109157[chr5:90599844]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs398109157[chr5:90599844]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90599840 90599855 PRDM1 JASPAR yes 64190322
chr5 90599840 90599855 STAT2 JASPAR yes 64190323
chr5 90599843 90599858 FOXP1 JASPAR yes 64190324
Genes associated with rs398109157[chr5:90599844], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More