EnhancerDB
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  3. rs398109990[chr6:25372485]
Enhancers that have rs398109990[chr6:25372485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25357285 25373535 enh38931
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs398109990[chr6:25372485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25372479 25372500 IRF1 JASPAR yes 100853057
chr6 25372485 25372500 FOXP1 JASPAR yes 100853058
Genes associated with rs398109990[chr6:25372485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More