EnhancerDB
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  3. rs398119939[chr17:60178223]
Enhancers that have rs398119939[chr17:60178223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60161225 60181195 enh32257
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs398119939[chr17:60178223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60178213 60178234 IRF1 JASPAR yes 55182143
chr17 60178217 60178238 IRF1 JASPAR yes 55182144
chr17 60178218 60178239 IRF1 JASPAR yes 55182145
chr17 60178219 60178234 STAT2 JASPAR yes 55182146
chr17 60178220 60178235 FOXP1 JASPAR yes 55182147
chr17 60178222 60178237 FOXP1 JASPAR yes 55182148
chr17 60178223 60178238 FOXP1 JASPAR yes 55182149
Genes associated with rs398119939[chr17:60178223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More