EnhancerDB
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  3. rs398120065[chr17:78751347]
Enhancers that have rs398120065[chr17:78751347]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs398120065[chr17:78751347]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78751334 78751349 HNF4A JASPAR yes 56278089
chr17 78751335 78751350 HNF4G JASPAR yes 56278090
chr17 78751335 78751350 LEF1 JASPAR yes 56278091
chr17 78751336 78751350 TCF7L2 JASPAR yes 56278092
chr17 78751340 78751352 FOXC2 JASPAR yes 56278095
chr17 78751342 78751357 FOXP1 JASPAR yes 56278096
chr17 78751344 78751359 FOXP1 JASPAR yes 56278097
Genes associated with rs398120065[chr17:78751347], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More