EnhancerDB
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  3. rs3989957[chr12:46774407]
Enhancers that have rs3989957[chr12:46774407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46774225 46791355 enh14675
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3989957[chr12:46774407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46773573 46774775 ZNF274 GTRD no Cervix (HeLa-S3) 21541104
chr12 46773707 46774560 ZNF274 GTRD no Cervix (HeLa-S3) 21541105
chr12 46773798 46774442 ZNF274 GTRD no Cervix (HeLa-S3) 21541106
chr12 46773810 46774707 ZNF274 GTRD no Cervix (HeLa-S3) 21541107
chr12 46773919 46775015 TEF1 GTRD no Bone (Osteoblast) 21541109
chr12 46774037 46774627 ZNF274 GTRD no Cervix (HeLa-S3) 21541110
chr12 46774393 46774408 FOXA1 JASPAR yes 120612732
chr12 46774394 46774409 FOXP1 JASPAR yes 120612734
chr12 46774395 46774407 FOXC2 JASPAR yes 120612735
chr12 46774395 46774409 FOXF2 JASPAR yes 120612736
chr12 46774395 46774409 ONECUT2 JASPAR yes 120612737
chr12 46774395 46774409 ONECUT3 JASPAR yes 120612738
chr12 46774396 46774407 FOXB1 JASPAR yes 120612739
chr12 46774396 46774407 FOXC1 JASPAR yes 120612740
chr12 46774397 46774412 MEF2A JASPAR yes 120612742
chr12 46774398 46774413 MEF2C JASPAR yes 120612743
chr12 46774398 46774419 IRF1 JASPAR yes 120612744
chr12 46774399 46774411 FOXC2 JASPAR yes 120612745
chr12 46774399 46774411 MEF2A JASPAR yes 120612746
chr12 46774399 46774411 MEF2B JASPAR yes 120612747
chr12 46774399 46774411 MEF2D JASPAR yes 120612748
chr12 46774400 46774410 MEF2A JASPAR yes 120612749
chr12 46774402 46774416 IRF7 JASPAR yes 120612751
chr12 46774407 46774411 YY1 TRANSFAC yes 120612752
Genes associated with rs3989957[chr12:46774407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More