EnhancerDB
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  3. rs3993878[chr14:92931983]
Enhancers that have rs3993878[chr14:92931983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 92930505 92944415 enh15870
Skin (Keratinocyte) Prostate (PC-3) Lung (PC-9) Esophagus Astrocyte Liver Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs3993878[chr14:92931983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 92931896 92933268 TCF7L2 GTRD no Colon (HCT116) 21634938
chr14 92931896 92933268 TCF7L2 GTRD no Colon (HCT116) 108119331
chr14 92931915 92934517 TCF7L2 GTRD no Colon (HCT116) 21634939
chr14 92931915 92934517 TCF7L2 GTRD no Colon (HCT116) 108119332
chr14 92931976 92931989 TFAP2A JASPAR yes 117328106
Genes associated with rs3993878[chr14:92931983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr14 92788925 92962596 + SLC24A4 ENSG00000140090.13 92788925 0 Adrenal 0.00670935 13573