EnhancerDB
  1. Home
  2. SNP
  3. rs400988[chr5:172157135]
Enhancers that have rs400988[chr5:172157135]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs400988[chr5:172157135]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172157126 172157135 SRY JASPAR yes 67818924
chr5 172157127 172157142 HSF1 JASPAR yes 67818925
chr5 172157128 172157141 HSF1 JASPAR yes 67818926
chr5 172157128 172157141 HSF2 JASPAR yes 67818927
Genes associated with rs400988[chr5:172157135], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More