EnhancerDB
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  3. rs4038371[chr12:125168262]
Enhancers that have rs4038371[chr12:125168262]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125156845 125176489 enh15094
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4038371[chr12:125168262]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125167858 125168454 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21581703
chr12 125167894 125168398 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581705
chr12 125168252 125168273 IRF1 JASPAR yes 124408331
chr12 125168254 125168269 PRDM1 JASPAR yes 124408333
chr12 125168254 125168269 STAT2 JASPAR yes 124408334
chr12 125168255 125168269 SPIC JASPAR yes 124408335
chr12 125168255 125168269 STAT1 JASPAR yes 124408336
chr12 125168256 125168271 IRF9 JASPAR yes 124408337
chr12 125168256 125168277 IRF1 JASPAR yes 124408338
chr12 125168257 125168272 FOXP1 JASPAR yes 124408339
chr12 125168257 125168278 IRF1 JASPAR yes 124408340
chr12 125168258 125168273 STAT2 JASPAR yes 124408341
Genes associated with rs4038371[chr12:125168262], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More