EnhancerDB
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  3. rs4060872[chr3:56906078]
Enhancers that have rs4060872[chr3:56906078]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56877665 56906735 enh35421
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Lung (PC-9) Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs4060872[chr3:56906078]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56906062 56906080 TP63 JASPAR yes 2606485
chr3 56906068 56906081 ZBTB18 JASPAR yes 2606486
chr3 56906069 56906081 PKNOX2 JASPAR yes 2606487
chr3 56906070 56906080 NEUROG2 JASPAR yes 2606488
chr3 56906070 56906082 TAL1 JASPAR yes 2606489
chr3 56906076 56906088 TEF JASPAR yes 2606490
chr3 56906078 56906085 NKX3-1 JASPAR yes 2606491
Genes associated with rs4060872[chr3:56906078], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More